Denkert, Ovarian cancer

Download the file

RNA from 80 frozen ovarian cancer samples was analysed with oligonucleotide microarrays (Affymetrix U133 A).
Data processing : Data are MAS5 normalized and transformed using log2 scale.


Information about this file
GenomicScape ID GS-DT-22
Species Homo sapiens
Cell types Ovarian
Study types Gene expression by array
Plateform/chip Affymetrix Human Genome U133 A
Normalization MAS5
Log2 scale ? yes
Number of samples 80
Grouping factors grade; cell_subpopulations; figo_stage; histological_type; residual_tumor
Survival data OS|OS_MONTS|Overall survival
External database Name: GEO | ID: GSE14764 | Link: http://0-www.ncbi.nlm.nih.gov.elis.tmu.edu.tw/geo/query/acc.cgi?acc=GSE14764
Citations Denkert C, Budczies J, Darb-Esfahani S, Györffy B et al. A prognostic gene expression index in ovarian cancer - validation across different independent data sets. J Pathol 2009 Jun;218(2):273-80. PMID: 19294737
Organization Charite - Universitaetsmedizin Berlin
Contact Name: Jan Budczies; Email: jan.budczies@charite.de; Department: Institute of Pathology; Institute: Charite - Universitaetsmedizin Berlin; Address: Chariteplatz 2; City: Berlin; Zip/postal_code: 10117; Country: Germany; Web_link: http://www.charite.de/ch/patho
File name code homo-sapiens_ovarian_gene-expression-by-array_affy-hg-u133a_mas5_GSE14764_GS-DT-22_2014-06-30
SuperSeries
Size 2.97 Mb
Upload date 06/30/14
Publication date 06/30/14
Date of release or last update 03/11/15
Downloaded
Number of views 1561 times